BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037G03LP1|AL430428
(886 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig29 1245 0.0
>3x_Contig29
Length = 885
Score = 1245 bits (628), Expect = 0.0
Identities = 745/784 (95%)
Strand = Plus / Plus
Query: 1 tatcacagtacttgttcatcgaagatcatgatatgacaattgtggaagttgatggtgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tatcacagtacttgttcatcgaagatcatgatatgacaattgtggaagttgatggtgttt 161
Query: 61 acgttgatccaacgaaggcaaaattgttatacattgctgcaggtcaaagaatgagcatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 acgttgatccaacgaaggcaaaattgttatacattgctgcaggtcaaagaatgagcatat 221
Query: 121 tggttaaatcgaagcatactaagtctaagaacttcgctttcatgcaaataatggatgatg 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tggttaactcgaagcatactaagtctaagaacttcgctttcatgcaaataatggatgatg 281
Query: 181 aaatgttagatgtgatcccagctgacttagaattgaataggacgaatactatttcataca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aaatgttagatgtgatcccagctgacttagaattgaataggacgaatactatttcataca 341
Query: 241 gctcaaagaacggagaagctaagcaagcttacattgatagtttcaaacacttcacgaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gctcaaagaacggagaagctaagcaagcttacattgatagtttcaaacacttcacgaatg 401
Query: 301 atttccatttggttactcgagctaagacagaactattagatacatacgattatcaaatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 atttccatttggttactcgagctaagacagaactattagatacatacgattatcaaatta 461
Query: 361 agctaaacgttgagatggagaatttgggtgatggtgttcaatatgctttcttcaataaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 agctaaacgttgagatggagaatttgggtgatggtgttcaatatgctttcttcaataaca 521
Query: 421 tcacatatgtggctccaaaggtcccaactttactcacagcattaagcgctggtaaacttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tcacatatgtggctccaaaggtcccaactttactcacagcattaagcgctggtaaacttg 581
Query: 481 ccaccaatccagccatctatggtgataatatcaatgcctttgttctagaatatggggaag 540
||||||||||||||||||||||||||||| ||| ||| |||||||||| || ||||||||
Sbjct: 582 ccaccaatccagccatctatggtgataatctcactgcatttgttctagcatctggggaag 641
Query: 541 ttgtcgaaatcgttgtgaacaatcatgatgctggtaaacatccgttccatttacatggtc 600
||||||| ||||| |||| ||| || |||||||||||| | ||||||||| |||||||
Sbjct: 642 ttgtcgagctcgttatgaaaaataataatgctggtaaaccacagttccatttccatggtc 701
Query: 601 atgttttccaagtggttcaaaaatcaggaggtagagaagatggtgaagatccaatcgact 660
||| ||||||||||||| | | ||||||||||||||| |||||||||||||||||||| |
Sbjct: 702 atgatttccaagtggttaacacatcaggaggtagagacgatggtgaagatccaatcgaat 761
Query: 661 acgatgagaagaacccagtatctgcatacccagaatacccagtactaagagatactgttg 720
| ||||||||||| | | ||||||| |||||||||||||||||| ||||||| ||||||
Sbjct: 762 aagatgagaagaaacaaatatctgcctacccagaatacccagtaataagagaaactgtta 821
Query: 721 tagtcgaatctttgggtcacgttgtcttacgtttccaagccacaaacccaggtatatggt 780
| |||||||||||||| || | | | ||| |||| |||||||||||||||||| ||||||
Sbjct: 822 ttgtcgaatctttgggacaagatatattaagttttcaagccacaaacccaggtttatggt 881
Query: 781 tctt 784
||||
Sbjct: 882 tctt 885
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6370
Number of Sequences: 1807
Number of extensions: 6370
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 886
length of database: 10,358,551
effective HSP length: 16
effective length of query: 870
effective length of database: 10,329,639
effective search space: 8986785930
effective search space used: 8986785930
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)